eDNA Expeditions 2026-2028

Motobu Reef Watch Site, Okinawa

Japan

Monitoring fish communities across habitats at Motobu, Okinawa, to understand how local biodiversity responds to long-term environmental change.

Motobu Reef Watch Site, Okinawa

View of the Motobu coast from Okinawa Churaumi Aquarium, Japan Photo: T. Hosono

What's at stake?

A World Natural Heritage adjacent area in the subtropical north-western Pacific, northern Okinawa combines coral reefs, rocky shores and sandy beaches with offshore humpback whale habitat and sea turtle nesting. Drawing some three million visitors a year, it is a place where tourism coexists with well-preserved nature and a culture historically shaped by skipjack fishing, offering valuable reference data for island coastal ecosystems across the region.

Communities involved

Local educational institutions engage through an Education Consortium, supported by the Urashima Laboratory and community groups across the area, with a dedicated community engagement lead in the site team.

Science plan summary

Main scientific question: Does fish species composition differ among coral reef, sandy beach and urban-adjacent rocky shore habitats?

Localities sampled (3): Sesoko (beach), Bise (coral reef), Yamakawa (rocky shore in a populated area)

Why there: One per habitat type, to test whether fish communities differ between them

Sampling dates: June–July (typhoons may cancel)

Why then: Early summer is the peak of biological activity: Mizun fish school nearshore, Acropora coral spawns, and hermit and coconut crabs release juveniles. They want to compare this with less active seasons, but only the June–July window is specified.

About our site

Motobu is located in the northern part of Okinawa Island in the subtropical northwestern Pacific and has a variety of coastal environments including coral reefs, rocky shores, and sandy beaches. Offshore waters serve as seasonal habitat for migrating humpback whales during winter, while well-developed coral reefs occur along the coast and sea turtles nest on sandy beaches. These conditions provide opportunities to observe diverse marine species.

At the same time, Motobu is a major tourist destination attracting approximately three million visitors annually, where human activities coexist with well-preserved natural environments. Motobu has a history of flourishing through skipjack fishing, and the town’s culture is deeply connected to the ocean.

Representing a typical coastal environment in the subtropical zone, the Motobu site provides valuable information for characterizing the current status of island coastal ecosystems in the northwestern Pacific.

“The three-year surveys will support documenting changes in the richness and distribution of tropical fishes at Motobu Reef, and help us better understand the impacts of ocean warming on local coastal ecosystems.”

What we plan to achieve

Through this learning-oriented survey focused on the Motobu area, this project aims to identify fish species that are representative of the local coastal ecosystem. By comparing these findings with existing data on fish assemblages from across Okinawa Island, we will characterize the distinctive features of the Motobu site.

Through continuous surveys of fish assemblages over a three-year period, we aim to document changes in species richness and distribution of tropical fishes, thereby contributing to understanding the impacts of global ocean warming on local coastal ecosystems. Collaboration with local educational institutions will promote ocean literacy and help establish a sustainable, community-based framework for long-term monitoring.